Cluster: CGMR030268_CGC73
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR030268
- CGC Family ID: CGCFAM_00158
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_92808 | k141_92808_9 | 10909 | 14208 | - | 1.B.14.6.1 |
| STP | k141_92808 | k141_92808_10 | 14321 | 15535 | - | FecR |
| STP | k141_92808 | k141_92808_11 | 15629 | 16213 | - | Sigma70_r2 | Sigma70_r4_2 |
| CAZyme | k141_92808 | k141_92808_12 | 16436 | 17800 | - | GH29 |
| pfam | k141_92808 | k141_92808_13 | 17884 | 19512 | - | SusD_RagB | SusD-like_3 |
| TC | k141_92808 | k141_92808_14 | 19549 | 22932 | - | 1.B.14.6.1 |
Gene ID: k141_92808_9
Type: TC
Location: 10909 - 14208 (-)
Type: TC
Location: 10909 - 14208 (-)
Gene ID: k141_92808_10
Type: STP
Location: 14321 - 15535 (-)
Type: STP
Location: 14321 - 15535 (-)
Gene ID: k141_92808_11
Type: STP
Location: 15629 - 16213 (-)
Type: STP
Location: 15629 - 16213 (-)
Gene ID: k141_92808_12
Type: CAZyme
Location: 16436 - 17800 (-)
Type: CAZyme
Location: 16436 - 17800 (-)
Gene ID: k141_92808_13
Type: pfam
Location: 17884 - 19512 (-)
Type: pfam
Location: 17884 - 19512 (-)
Gene ID: k141_92808_14
Type: TC
Location: 19549 - 22932 (-)
Type: TC
Location: 19549 - 22932 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides chongii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_92808_11 | vegan > omnivore | 1.42681 | 0.04957 |