Cluster: CGMR030268_CGC62
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR030268
- CGC Family ID: CGCFAM_00150
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_135354 | k141_135354_13 | 12379 | 14316 | - | CBM62 |
| NULL(UNKNOWN) | k141_135354 | k141_135354_14 | 14715 | 14822 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_135354 | k141_135354_15 | 14788 | 16737 | - | CBM62 |
| STP | k141_135354 | k141_135354_16 | 17386 | 18021 | + | Sigma70_r2 | Sigma70_r4_2 |
| STP | k141_135354 | k141_135354_17 | 18157 | 19161 | + | FecR |
| TC | k141_135354 | k141_135354_18 | 19206 | 22466 | + | 1.B.14.6.1 |
| TC | k141_135354 | k141_135354_19 | 22484 | 24013 | + | 8.A.46.1.3 |
| CAZyme | k141_135354 | k141_135354_20 | 24033 | 25523 | + | GH29 |
| NULL(UNKNOWN) | k141_135354 | k141_135354_21 | 25800 | 25949 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_135354 | k141_135354_22 | 26049 | 27050 | - | DUF5128 |
| TC | k141_135354 | k141_135354_23 | 27203 | 28075 | + | 1.A.1.24.3 |
| CAZyme | k141_135354 | k141_135354_24 | 28267 | 30945 | + | GH38 |
| CAZyme | k141_135354 | k141_135354_25 | 30959 | 33331 | + | GH92 |
Gene ID: k141_135354_13
Type: CAZyme
Location: 12379 - 14316 (-)
Type: CAZyme
Location: 12379 - 14316 (-)
Gene ID: k141_135354_14
Type:
Location: 14715 - 14822 (+)
Type:
Location: 14715 - 14822 (+)
Gene ID: k141_135354_15
Type: CAZyme
Location: 14788 - 16737 (-)
Type: CAZyme
Location: 14788 - 16737 (-)
Gene ID: k141_135354_16
Type: STP
Location: 17386 - 18021 (+)
Type: STP
Location: 17386 - 18021 (+)
Gene ID: k141_135354_17
Type: STP
Location: 18157 - 19161 (+)
Type: STP
Location: 18157 - 19161 (+)
Gene ID: k141_135354_18
Type: TC
Location: 19206 - 22466 (+)
Type: TC
Location: 19206 - 22466 (+)
Gene ID: k141_135354_19
Type: TC
Location: 22484 - 24013 (+)
Type: TC
Location: 22484 - 24013 (+)
Gene ID: k141_135354_20
Type: CAZyme
Location: 24033 - 25523 (+)
Type: CAZyme
Location: 24033 - 25523 (+)
Gene ID: k141_135354_21
Type:
Location: 25800 - 25949 (-)
Type:
Location: 25800 - 25949 (-)
Gene ID: k141_135354_22
Type: pfam
Location: 26049 - 27050 (-)
Type: pfam
Location: 26049 - 27050 (-)
Gene ID: k141_135354_23
Type: TC
Location: 27203 - 28075 (+)
Type: TC
Location: 27203 - 28075 (+)
Gene ID: k141_135354_24
Type: CAZyme
Location: 28267 - 30945 (+)
Type: CAZyme
Location: 28267 - 30945 (+)
Gene ID: k141_135354_25
Type: CAZyme
Location: 30959 - 33331 (+)
Type: CAZyme
Location: 30959 - 33331 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides chongii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.