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Cluster: CGMR030268_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_71847 k141_71847_52 70558 72114 + 2.A.3.7.1
pfam k141_71847 k141_71847_53 72218 72802 - RbsD_FucU
CAZyme k141_71847 k141_71847_54 72808 75357 - GH116
TC k141_71847 k141_71847_55 75419 77050 - 8.A.46.1.3
TC k141_71847 k141_71847_56 77056 80397 - 1.B.14.6.1
STP k141_71847 k141_71847_57 80541 81518 - FecR
TF k141_71847 k141_71847_58 81595 82173 - GerE
CAZyme k141_71847 k141_71847_59 82489 84528 - GH151
pfam k141_71847 k141_71847_60 84627 85085 - BT_3987-like_N
pfam k141_71847 k141_71847_61 85118 86863 - SusD_RagB | SusD-like_3
TC k141_71847 k141_71847_62 86875 90243 - 1.B.14.6.1
Gene ID: k141_71847_52
Type: TC
Location: 70558 - 72114 (+)
Gene ID: k141_71847_53
Type: pfam
Location: 72218 - 72802 (-)
Gene ID: k141_71847_54
Type: CAZyme
Location: 72808 - 75357 (-)
Gene ID: k141_71847_55
Type: TC
Location: 75419 - 77050 (-)
Gene ID: k141_71847_56
Type: TC
Location: 77056 - 80397 (-)
Gene ID: k141_71847_57
Type: STP
Location: 80541 - 81518 (-)
Gene ID: k141_71847_58
Type: TF
Location: 81595 - 82173 (-)
Gene ID: k141_71847_59
Type: CAZyme
Location: 82489 - 84528 (-)
Gene ID: k141_71847_60
Type: pfam
Location: 84627 - 85085 (-)
Gene ID: k141_71847_61
Type: pfam
Location: 85118 - 86863 (-)
Gene ID: k141_71847_62
Type: TC
Location: 86875 - 90243 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_71847_54 vegan > omnivore 1.50163 0.04957

🧭 Explore Read Mapping of CGC

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