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Cluster: CGMR030268_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_114653 k141_114653_37 53236 56553 + 1.B.14.6.1
pfam k141_114653 k141_114653_38 56565 58199 + SusD_RagB | SusD-like_3
CAZyme k141_114653 k141_114653_39 58211 59782 + GH30_4
TF k141_114653 k141_114653_40 59818 60456 + GerE
STP k141_114653 k141_114653_41 60595 61611 + FecR
TC k141_114653 k141_114653_42 61798 65088 + 1.B.14.6.1
pfam k141_114653 k141_114653_43 65123 66733 + SusD_RagB | SusD-like_3
CAZyme k141_114653 k141_114653_44 66841 68421 + CBM91 | GH43_10
CAZyme k141_114653 k141_114653_45 68438 70825 + GH95
CAZyme k141_114653 k141_114653_46 70832 73231 + GH95
CAZyme k141_114653 k141_114653_47 73228 75051 + GH120
CAZyme k141_114653 k141_114653_48 75075 77543 + GH35
Gene ID: k141_114653_37
Type: TC
Location: 53236 - 56553 (+)
Gene ID: k141_114653_38
Type: pfam
Location: 56565 - 58199 (+)
Gene ID: k141_114653_39
Type: CAZyme
Location: 58211 - 59782 (+)
Gene ID: k141_114653_40
Type: TF
Location: 59818 - 60456 (+)
Gene ID: k141_114653_41
Type: STP
Location: 60595 - 61611 (+)
Gene ID: k141_114653_42
Type: TC
Location: 61798 - 65088 (+)
Gene ID: k141_114653_43
Type: pfam
Location: 65123 - 66733 (+)
Gene ID: k141_114653_44
Type: CAZyme
Location: 66841 - 68421 (+)
Gene ID: k141_114653_45
Type: CAZyme
Location: 68438 - 70825 (+)
Gene ID: k141_114653_46
Type: CAZyme
Location: 70832 - 73231 (+)
Gene ID: k141_114653_47
Type: CAZyme
Location: 73228 - 75051 (+)
Gene ID: k141_114653_48
Type: CAZyme
Location: 75075 - 77543 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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