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Cluster: CGMR030268_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_59307 k141_59307_9 7672 9069 - 2.A.1.1.55
NULL(UNKNOWN) k141_59307 k141_59307_10 9080 11215 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_59307 k141_59307_11 11305 13038 - SusD_RagB | SusD-like_3
TC k141_59307 k141_59307_12 13050 16517 - 1.B.14.6.1
STP k141_59307 k141_59307_13 16706 17761 - FecR
TF k141_59307 k141_59307_14 17910 18464 + GerE
TC k141_59307 k141_59307_15 18794 21601 + 1.C.105.2.12
CAZyme k141_59307 k141_59307_16 21728 23014 - GH177
Gene ID: k141_59307_9
Type: TC
Location: 7672 - 9069 (-)
Gene ID: k141_59307_10
Type:
Location: 9080 - 11215 (-)
Gene ID: k141_59307_11
Type: pfam
Location: 11305 - 13038 (-)
Gene ID: k141_59307_12
Type: TC
Location: 13050 - 16517 (-)
Gene ID: k141_59307_13
Type: STP
Location: 16706 - 17761 (-)
Gene ID: k141_59307_14
Type: TF
Location: 17910 - 18464 (+)
Gene ID: k141_59307_15
Type: TC
Location: 18794 - 21601 (+)
Gene ID: k141_59307_16
Type: CAZyme
Location: 21728 - 23014 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_59307_16 vegetarian > omnivore 1.59478 0.01030
k141_59307_16 vegetarian > vegan 2.34465 0.03644

🧭 Explore Read Mapping of CGC

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