Cluster: CGMR030268_CGC16
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR030268
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_153857 | k141_153857_91 | 118208 | 119830 | - | 8.A.46.1.3 |
| TC | k141_153857 | k141_153857_92 | 119843 | 123244 | - | 1.B.14.6.1 |
| STP | k141_153857 | k141_153857_93 | 123367 | 124365 | - | FecR |
| TC | k141_153857 | k141_153857_94 | 124678 | 126144 | + | 2.A.35.1.3 |
| TC | k141_153857 | k141_153857_95 | 126113 | 127309 | + | 2.A.23.2.11 |
| pfam | k141_153857 | k141_153857_96 | 127319 | 127846 | - | RNase_T | Rv2179c-like |
| sulfatase | k141_153857 | k141_153857_97 | 128119 | 128796 | - | S1_7 |
| CAZyme | k141_153857 | k141_153857_98 | 128826 | 130031 | - | GH109 |
| NULL(UNKNOWN) | k141_153857 | k141_153857_99 | 130091 | 131113 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_153857 | k141_153857_100 | 131129 | 133414 | - | GH20 |
| CAZyme | k141_153857 | k141_153857_101 | 133508 | 134686 | - | GH33 |
| TC | k141_153857 | k141_153857_102 | 134715 | 136217 | - | 8.A.46.1.4 |
| TC | k141_153857 | k141_153857_103 | 136230 | 139712 | - | 1.B.14.6.1 |
Gene ID: k141_153857_91
Type: TC
Location: 118208 - 119830 (-)
Type: TC
Location: 118208 - 119830 (-)
Gene ID: k141_153857_92
Type: TC
Location: 119843 - 123244 (-)
Type: TC
Location: 119843 - 123244 (-)
Gene ID: k141_153857_93
Type: STP
Location: 123367 - 124365 (-)
Type: STP
Location: 123367 - 124365 (-)
Gene ID: k141_153857_94
Type: TC
Location: 124678 - 126144 (+)
Type: TC
Location: 124678 - 126144 (+)
Gene ID: k141_153857_95
Type: TC
Location: 126113 - 127309 (+)
Type: TC
Location: 126113 - 127309 (+)
Gene ID: k141_153857_96
Type: pfam
Location: 127319 - 127846 (-)
Type: pfam
Location: 127319 - 127846 (-)
Gene ID: k141_153857_97
Type: sulfatase
Location: 128119 - 128796 (-)
Type: sulfatase
Location: 128119 - 128796 (-)
Gene ID: k141_153857_98
Type: CAZyme
Location: 128826 - 130031 (-)
Type: CAZyme
Location: 128826 - 130031 (-)
Gene ID: k141_153857_99
Type:
Location: 130091 - 131113 (-)
Type:
Location: 130091 - 131113 (-)
Gene ID: k141_153857_100
Type: CAZyme
Location: 131129 - 133414 (-)
Type: CAZyme
Location: 131129 - 133414 (-)
Gene ID: k141_153857_101
Type: CAZyme
Location: 133508 - 134686 (-)
Type: CAZyme
Location: 133508 - 134686 (-)
Gene ID: k141_153857_102
Type: TC
Location: 134715 - 136217 (-)
Type: TC
Location: 134715 - 136217 (-)
Gene ID: k141_153857_103
Type: TC
Location: 136230 - 139712 (-)
Type: TC
Location: 136230 - 139712 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides chongii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_153857_91 | vegetarian > omnivore | 1.75058 | 0.01030 |
| k141_153857_92 | vegetarian > omnivore | 1.66050 | 0.00566 |
| k141_153857_93 | vegetarian > omnivore | 1.80222 | 0.00566 |
| k141_153857_93 | vegan > omnivore | 1.51581 | 0.04957 |
| k141_153857_98 | vegetarian > omnivore | 1.90284 | 0.01030 |
| k141_153857_98 | vegetarian > vegan | 1.63440 | 0.03644 |
| k141_153857_99 | vegetarian > vegan | 1.73439 | 0.03644 |
| k141_153857_100 | vegetarian > vegan | 1.73862 | 0.03644 |
| k141_153857_100 | vegetarian > omnivore | 1.68361 | 0.01030 |