Cluster: CGMR030268_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: CGMR030268
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_22083 | k141_22083_12 | 17860 | 20061 | - | GH3 |
| CAZyme | k141_22083 | k141_22083_13 | 20068 | 21333 | - | GH5_46 |
| CAZyme | k141_22083 | k141_22083_14 | 21339 | 23591 | - | GH3 |
| pfam | k141_22083 | k141_22083_15 | 23687 | 25123 | - | PKD | PKD_4 |
| pfam | k141_22083 | k141_22083_16 | 25157 | 26686 | - | SusD_RagB | SusD-like_3 |
| TC | k141_22083 | k141_22083_17 | 26708 | 29944 | - | 1.B.14.6.1 |
Gene ID: k141_22083_12
Type: CAZyme
Location: 17860 - 20061 (-)
Type: CAZyme
Location: 17860 - 20061 (-)
Gene ID: k141_22083_13
Type: CAZyme
Location: 20068 - 21333 (-)
Type: CAZyme
Location: 20068 - 21333 (-)
Gene ID: k141_22083_14
Type: CAZyme
Location: 21339 - 23591 (-)
Type: CAZyme
Location: 21339 - 23591 (-)
Gene ID: k141_22083_15
Type: pfam
Location: 23687 - 25123 (-)
Type: pfam
Location: 23687 - 25123 (-)
Gene ID: k141_22083_16
Type: pfam
Location: 25157 - 26686 (-)
Type: pfam
Location: 25157 - 26686 (-)
Gene ID: k141_22083_17
Type: TC
Location: 26708 - 29944 (-)
Type: TC
Location: 26708 - 29944 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides chongii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.