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Cluster: CGMR030268_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_78703 k141_78703_11 12602 13699 + 3.D.7.2.3
TC k141_78703 k141_78703_12 13712 15433 + 3.D.7.2.3
TC k141_78703 k141_78703_13 15445 16185 + 3.D.7.2.3
peptidase k141_78703 k141_78703_14 16178 16621 + A31.UPW
pfam k141_78703 k141_78703_15 16631 18142 - FGGY_N | FGGY_C
CAZyme k141_78703 k141_78703_16 18273 20618 - GT51
TC k141_78703 k141_78703_17 20654 21595 - 2.A.98.1.4
Gene ID: k141_78703_11
Type: TC
Location: 12602 - 13699 (+)
Gene ID: k141_78703_12
Type: TC
Location: 13712 - 15433 (+)
Gene ID: k141_78703_13
Type: TC
Location: 15445 - 16185 (+)
Gene ID: k141_78703_14
Type: peptidase
Location: 16178 - 16621 (+)
Gene ID: k141_78703_15
Type: pfam
Location: 16631 - 18142 (-)
Gene ID: k141_78703_16
Type: CAZyme
Location: 18273 - 20618 (-)
Gene ID: k141_78703_17
Type: TC
Location: 20654 - 21595 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_78703_14 vegetarian > omnivore 2.23194 0.01030

🧭 Explore Read Mapping of CGC

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