Cluster: CGMR029990_CGC9
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate: pectin
- Genome ID: CGMR029990
- CGC Family ID: CGCFAM_00079
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_395224 | k141_395224_44 | 50934 | 53945 | + | 1.B.14.6.2 |
| TC | k141_395224 | k141_395224_45 | 53966 | 55513 | + | 8.A.46.1.3 |
| pfam | k141_395224 | k141_395224_46 | 55536 | 57029 | + | DUF4886 |
| peptidase | k141_395224 | k141_395224_47 | 57383 | 60427 | + | I39.UPW |
| TC | k141_395224 | k141_395224_48 | 60455 | 62002 | + | 8.A.46.1.3 |
| pfam | k141_395224 | k141_395224_49 | 62058 | 62867 | + | Laminin_G_3 |
| CAZyme | k141_395224 | k141_395224_50 | 62876 | 64603 | + | GH144 |
| CAZyme | k141_395224 | k141_395224_51 | 64732 | 66072 | + | GH144 |
| CAZyme | k141_395224 | k141_395224_52 | 66179 | 66787 | + | GH43_28 |
Gene ID: k141_395224_44
Type: TC
Location: 50934 - 53945 (+)
Type: TC
Location: 50934 - 53945 (+)
Gene ID: k141_395224_45
Type: TC
Location: 53966 - 55513 (+)
Type: TC
Location: 53966 - 55513 (+)
Gene ID: k141_395224_46
Type: pfam
Location: 55536 - 57029 (+)
Type: pfam
Location: 55536 - 57029 (+)
Gene ID: k141_395224_47
Type: peptidase
Location: 57383 - 60427 (+)
Type: peptidase
Location: 57383 - 60427 (+)
Gene ID: k141_395224_48
Type: TC
Location: 60455 - 62002 (+)
Type: TC
Location: 60455 - 62002 (+)
Gene ID: k141_395224_49
Type: pfam
Location: 62058 - 62867 (+)
Type: pfam
Location: 62058 - 62867 (+)
Gene ID: k141_395224_50
Type: CAZyme
Location: 62876 - 64603 (+)
Type: CAZyme
Location: 62876 - 64603 (+)
Gene ID: k141_395224_51
Type: CAZyme
Location: 64732 - 66072 (+)
Type: CAZyme
Location: 64732 - 66072 (+)
Gene ID: k141_395224_52
Type: CAZyme
Location: 66179 - 66787 (+)
Type: CAZyme
Location: 66179 - 66787 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Haoranjiania
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.