Cluster: CGMR029990_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate: pectin/alpha-glucan
- Genome ID: CGMR029990
- CGC Family ID: CGCFAM_00025
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_283466 | k141_283466_1 | 1 | 2991 | + | 1.B.14.6.1 |
| TC | k141_283466 | k141_283466_2 | 3107 | 4717 | + | 8.A.46.1.1 |
| pfam | k141_283466 | k141_283466_3 | 4761 | 5573 | + | SusE | SusF_SusE |
| pfam | k141_283466 | k141_283466_4 | 5599 | 6990 | + | SusE | SusE |
| CAZyme | k141_283466 | k141_283466_5 | 7396 | 9246 | + | GH13_46 |
| pfam | k141_283466 | k141_283466_6 | 9415 | 9729 | + | GIY-YIG | T5orf172 |
| CAZyme | k141_283466 | k141_283466_7 | 10045 | 11793 | + | GH13_38 |
| TC | k141_283466 | k141_283466_8 | 11799 | 13172 | + | 2.A.2.6.3 |
Gene ID: k141_283466_1
Type: TC
Location: 1 - 2991 (+)
Type: TC
Location: 1 - 2991 (+)
Gene ID: k141_283466_2
Type: TC
Location: 3107 - 4717 (+)
Type: TC
Location: 3107 - 4717 (+)
Gene ID: k141_283466_3
Type: pfam
Location: 4761 - 5573 (+)
Type: pfam
Location: 4761 - 5573 (+)
Gene ID: k141_283466_4
Type: pfam
Location: 5599 - 6990 (+)
Type: pfam
Location: 5599 - 6990 (+)
Gene ID: k141_283466_5
Type: CAZyme
Location: 7396 - 9246 (+)
Type: CAZyme
Location: 7396 - 9246 (+)
Gene ID: k141_283466_6
Type: pfam
Location: 9415 - 9729 (+)
Type: pfam
Location: 9415 - 9729 (+)
Gene ID: k141_283466_7
Type: CAZyme
Location: 10045 - 11793 (+)
Type: CAZyme
Location: 10045 - 11793 (+)
Gene ID: k141_283466_8
Type: TC
Location: 11799 - 13172 (+)
Type: TC
Location: 11799 - 13172 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Haoranjiania
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.