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Cluster: CGMR029990_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_34553 k141_34553_40 57202 58602 + CE11
TF k141_34553 k141_34553_41 58658 59569 + HTH_AraC
TC k141_34553 k141_34553_42 60230 61732 + 3.A.2.1.3
pfam k141_34553 k141_34553_43 61785 62135 + 23S_rRNA_IVP
TC k141_34553 k141_34553_44 62185 62436 + 3.A.2.1.6
NULL(UNKNOWN) k141_34553 k141_34553_45 62646 62915 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_34553 k141_34553_46 62945 63181 + DDE_Tnp_IS1
CAZyme k141_34553 k141_34553_47 63498 64757 - GH88
CAZyme k141_34553 k141_34553_48 64781 66712 - PL33_1
TC k141_34553 k141_34553_49 66714 68351 - 8.A.46.1.3
TC k141_34553 k141_34553_50 68405 71500 - 1.B.14.6.1
Gene ID: k141_34553_40
Type: CAZyme
Location: 57202 - 58602 (+)
Gene ID: k141_34553_41
Type: TF
Location: 58658 - 59569 (+)
Gene ID: k141_34553_42
Type: TC
Location: 60230 - 61732 (+)
Gene ID: k141_34553_43
Type: pfam
Location: 61785 - 62135 (+)
Gene ID: k141_34553_44
Type: TC
Location: 62185 - 62436 (+)
Gene ID: k141_34553_45
Type:
Location: 62646 - 62915 (+)
Gene ID: k141_34553_46
Type: pfam
Location: 62945 - 63181 (+)
Gene ID: k141_34553_47
Type: CAZyme
Location: 63498 - 64757 (-)
Gene ID: k141_34553_48
Type: CAZyme
Location: 64781 - 66712 (-)
Gene ID: k141_34553_49
Type: TC
Location: 66714 - 68351 (-)
Gene ID: k141_34553_50
Type: TC
Location: 68405 - 71500 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Chitinophagales
→
Family
Chitinophagaceae
→
Genus
Haoranjiania
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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