dbCAN Logo

Cluster: CGMR029990_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_102946 k141_102946_51 45407 46891 + 9.B.156.3.1
NULL(UNKNOWN) k141_102946 k141_102946_52 46996 47475 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_102946 k141_102946_53 47547 47930 - GtrA_DPMS_TM
CAZyme k141_102946 k141_102946_54 47974 49536 - GT83
pfam k141_102946 k141_102946_55 49707 50756 - Queuosine_synth
pfam k141_102946 k141_102946_56 50950 51411 + NlpE
TC k141_102946 k141_102946_57 51415 53079 - 3.A.1.5.11
TC k141_102946 k141_102946_58 53156 54985 - 3.A.1.106.3
pfam k141_102946 k141_102946_59 55141 56805 - PG_binding_1 | YkuD | Scaffold
pfam k141_102946 k141_102946_60 56827 57528 - Methyltrans_RNA | PUA_4
TC k141_102946 k141_102946_61 57592 58368 - 9.B.186.1.1
Gene ID: k141_102946_51
Type: TC
Location: 45407 - 46891 (+)
Gene ID: k141_102946_52
Type:
Location: 46996 - 47475 (+)
Gene ID: k141_102946_53
Type: pfam
Location: 47547 - 47930 (-)
Gene ID: k141_102946_54
Type: CAZyme
Location: 47974 - 49536 (-)
Gene ID: k141_102946_55
Type: pfam
Location: 49707 - 50756 (-)
Gene ID: k141_102946_56
Type: pfam
Location: 50950 - 51411 (+)
Gene ID: k141_102946_57
Type: TC
Location: 51415 - 53079 (-)
Gene ID: k141_102946_58
Type: TC
Location: 53156 - 54985 (-)
Gene ID: k141_102946_59
Type: pfam
Location: 55141 - 56805 (-)
Gene ID: k141_102946_60
Type: pfam
Location: 56827 - 57528 (-)
Gene ID: k141_102946_61
Type: TC
Location: 57592 - 58368 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List