Cluster: CGMR029990_CGC11
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR029990
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_359909 | k141_359909_13 | 20319 | 20747 | + | 1.A.22.1.4 |
| pfam | k141_359909 | k141_359909_14 | 20816 | 21586 | + | SMC_ScpA |
| TF | k141_359909 | k141_359909_15 | 21589 | 22476 | - | HTH_AraC |
| TC | k141_359909 | k141_359909_16 | 22823 | 24655 | + | 2.A.21.3.8 |
| CAZyme | k141_359909 | k141_359909_17 | 24680 | 25870 | + | GH130_1 |
| CAZyme | k141_359909 | k141_359909_18 | 26057 | 27826 | + | GH51_5 |
| TC | k141_359909 | k141_359909_19 | 28080 | 31283 | + | 1.B.14.6.1 |
| pfam | k141_359909 | k141_359909_20 | 31297 | 32943 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_359909 | k141_359909_21 | 32976 | 34244 | + | SGBP_B_XBD |
| CAZyme | k141_359909 | k141_359909_22 | 34585 | 40083 | + | CBM57 | GH74 | GH74 |
| CAZyme | k141_359909 | k141_359909_23 | 40477 | 42648 | + | GH74 | GH74 |
| CAZyme | k141_359909 | k141_359909_24 | 42770 | 45172 | + | GH3 |
Gene ID: k141_359909_13
Type: TC
Location: 20319 - 20747 (+)
Type: TC
Location: 20319 - 20747 (+)
Gene ID: k141_359909_14
Type: pfam
Location: 20816 - 21586 (+)
Type: pfam
Location: 20816 - 21586 (+)
Gene ID: k141_359909_15
Type: TF
Location: 21589 - 22476 (-)
Type: TF
Location: 21589 - 22476 (-)
Gene ID: k141_359909_16
Type: TC
Location: 22823 - 24655 (+)
Type: TC
Location: 22823 - 24655 (+)
Gene ID: k141_359909_17
Type: CAZyme
Location: 24680 - 25870 (+)
Type: CAZyme
Location: 24680 - 25870 (+)
Gene ID: k141_359909_18
Type: CAZyme
Location: 26057 - 27826 (+)
Type: CAZyme
Location: 26057 - 27826 (+)
Gene ID: k141_359909_19
Type: TC
Location: 28080 - 31283 (+)
Type: TC
Location: 28080 - 31283 (+)
Gene ID: k141_359909_20
Type: pfam
Location: 31297 - 32943 (+)
Type: pfam
Location: 31297 - 32943 (+)
Gene ID: k141_359909_21
Type: pfam
Location: 32976 - 34244 (+)
Type: pfam
Location: 32976 - 34244 (+)
Gene ID: k141_359909_22
Type: CAZyme
Location: 34585 - 40083 (+)
Type: CAZyme
Location: 34585 - 40083 (+)
Gene ID: k141_359909_23
Type: CAZyme
Location: 40477 - 42648 (+)
Type: CAZyme
Location: 40477 - 42648 (+)
Gene ID: k141_359909_24
Type: CAZyme
Location: 42770 - 45172 (+)
Type: CAZyme
Location: 42770 - 45172 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Haoranjiania
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.