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Cluster: CGMR029990_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_40857 k141_40857_16 13143 15209 + 1.B.14.15.4
pfam k141_40857 k141_40857_17 15221 16234 + FAD_binding_4 | MurB_C
pfam k141_40857 k141_40857_18 16241 17698 + PLDc_2 | PLDc_2 | PLDc_N
CAZyme k141_40857 k141_40857_19 17863 19842 + GH3
TC k141_40857 k141_40857_20 19939 21354 - 2.A.6.2.20
TC k141_40857 k141_40857_21 21385 24576 - 2.A.6.2.44
TC k141_40857 k141_40857_22 24610 25776 - 2.A.6.2.40
Gene ID: k141_40857_16
Type: TC
Location: 13143 - 15209 (+)
Gene ID: k141_40857_17
Type: pfam
Location: 15221 - 16234 (+)
Gene ID: k141_40857_18
Type: pfam
Location: 16241 - 17698 (+)
Gene ID: k141_40857_19
Type: CAZyme
Location: 17863 - 19842 (+)
Gene ID: k141_40857_20
Type: TC
Location: 19939 - 21354 (-)
Gene ID: k141_40857_21
Type: TC
Location: 21385 - 24576 (-)
Gene ID: k141_40857_22
Type: TC
Location: 24610 - 25776 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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