Cluster: CGMR029599_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR029599
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_242597 | k141_242597_1 | 460 | 1464 | + | GT4 |
| pfam | k141_242597 | k141_242597_2 | 1476 | 2585 | + | LPG_synthase_TM |
| CAZyme | k141_242597 | k141_242597_3 | 2595 | 4589 | + | GT4 |
| STP | k141_242597 | k141_242597_4 | 4582 | 5532 | + | HD |
| TC | k141_242597 | k141_242597_5 | 5648 | 5953 | + | 4.A.3.2.3 |
Gene ID: k141_242597_1
Type: CAZyme
Location: 460 - 1464 (+)
Type: CAZyme
Location: 460 - 1464 (+)
Gene ID: k141_242597_2
Type: pfam
Location: 1476 - 2585 (+)
Type: pfam
Location: 1476 - 2585 (+)
Gene ID: k141_242597_3
Type: CAZyme
Location: 2595 - 4589 (+)
Type: CAZyme
Location: 2595 - 4589 (+)
Gene ID: k141_242597_4
Type: STP
Location: 4582 - 5532 (+)
Type: STP
Location: 4582 - 5532 (+)
Gene ID: k141_242597_5
Type: TC
Location: 5648 - 5953 (+)
Type: TC
Location: 5648 - 5953 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_242597_5 | vegan > omnivore | 2.82994 | 0.00358 |
| k141_242597_5 | vegetarian > omnivore | 1.81726 | 0.03463 |