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Cluster: CGMR029599_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_8644 k141_8644_33 28457 29401 - GT2
pfam k141_8644 k141_8644_34 29404 30663 - DUF6056
pfam k141_8644 k141_8644_35 30675 31154 - Glyco_tran_28_C
CAZyme k141_8644 k141_8644_36 31154 33616 - GT4
CAZyme k141_8644 k141_8644_37 33701 34669 - GT2
pfam k141_8644 k141_8644_38 34689 36275 - Lipase_GDSL | Lipase_GDSL_2 | Lipase_GDSL_lke
TC k141_8644 k141_8644_39 36275 37051 - 3.A.1.103.4
TC k141_8644 k141_8644_40 37060 37785 - 3.A.1.103.4
Gene ID: k141_8644_33
Type: CAZyme
Location: 28457 - 29401 (-)
Gene ID: k141_8644_34
Type: pfam
Location: 29404 - 30663 (-)
Gene ID: k141_8644_35
Type: pfam
Location: 30675 - 31154 (-)
Gene ID: k141_8644_36
Type: CAZyme
Location: 31154 - 33616 (-)
Gene ID: k141_8644_37
Type: CAZyme
Location: 33701 - 34669 (-)
Gene ID: k141_8644_38
Type: pfam
Location: 34689 - 36275 (-)
Gene ID: k141_8644_39
Type: TC
Location: 36275 - 37051 (-)
Gene ID: k141_8644_40
Type: TC
Location: 37060 - 37785 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_8644_40 vegetarian > omnivore 2.43491 0.02605

🧭 Explore Read Mapping of CGC

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