Cluster: CGMR029506_CGC2
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: CGMR029506
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_91052 | k141_91052_2 | 2742 | 4607 | - | 4.A.2.1.4 |
| STP | k141_91052 | k141_91052_3 | 4616 | 5536 | - | PfkB |
| TF | k141_91052 | k141_91052_4 | 5533 | 6234 | - | HTH_DeoR |
| CAZyme | k141_91052 | k141_91052_5 | 6423 | 7844 | - | GT5 |
| pfam | k141_91052 | k141_91052_6 | 7855 | 9018 | - | NTP_transferase | Hexapep_GlmU |
| pfam | k141_91052 | k141_91052_7 | 9037 | 10182 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | k141_91052 | k141_91052_8 | 10209 | 12044 | - | CBM48 | GH13_9 |
| CAZyme | k141_91052 | k141_91052_9 | 12050 | 14413 | - | GT35 |
Gene ID: k141_91052_2
Type: TC
Location: 2742 - 4607 (-)
Type: TC
Location: 2742 - 4607 (-)
Gene ID: k141_91052_3
Type: STP
Location: 4616 - 5536 (-)
Type: STP
Location: 4616 - 5536 (-)
Gene ID: k141_91052_4
Type: TF
Location: 5533 - 6234 (-)
Type: TF
Location: 5533 - 6234 (-)
Gene ID: k141_91052_5
Type: CAZyme
Location: 6423 - 7844 (-)
Type: CAZyme
Location: 6423 - 7844 (-)
Gene ID: k141_91052_6
Type: pfam
Location: 7855 - 9018 (-)
Type: pfam
Location: 7855 - 9018 (-)
Gene ID: k141_91052_7
Type: pfam
Location: 9037 - 10182 (-)
Type: pfam
Location: 9037 - 10182 (-)
Gene ID: k141_91052_8
Type: CAZyme
Location: 10209 - 12044 (-)
Type: CAZyme
Location: 10209 - 12044 (-)
Gene ID: k141_91052_9
Type: CAZyme
Location: 12050 - 14413 (-)
Type: CAZyme
Location: 12050 - 14413 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.