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Cluster: CGMR029416_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_7761 k141_7761_61 76144 76938 - 3.A.1.1.20
TC k141_7761 k141_7761_62 76968 77894 - 3.A.1.1.36
TC k141_7761 k141_7761_63 77963 79285 - 3.A.1.1.3
TF k141_7761 k141_7761_64 79656 80420 + HTH_DeoR
pfam k141_7761 k141_7761_65 80431 81099 + PHP_C
CAZyme k141_7761 k141_7761_66 81181 83019 - GH127
STP k141_7761 k141_7761_67 83170 84942 - HATPase_c | dCache_1
TF k141_7761 k141_7761_68 84932 86503 - HTH_AraC
TC k141_7761 k141_7761_69 86720 87631 + 3.A.1.1.11
TC k141_7761 k141_7761_70 87624 88448 + 3.A.1.1.11
TC k141_7761 k141_7761_71 88480 89739 + 3.A.1.1.40
TF k141_7761 k141_7761_72 89795 91243 - GntR | GntR
STP k141_7761 k141_7761_73 91405 93615 + EAL | GGDEF | dCache_1
CAZyme k141_7761 k141_7761_74 93653 95707 - GH3
TF k141_7761 k141_7761_75 95838 96500 - Trans_reg_C
TF k141_7761 k141_7761_76 96809 97135 + HTH_5
TC k141_7761 k141_7761_77 97221 98393 - 3.A.1.122.2
TC k141_7761 k141_7761_78 98390 99103 - 3.A.1.122.2
Gene ID: k141_7761_61
Type: TC
Location: 76144 - 76938 (-)
Gene ID: k141_7761_62
Type: TC
Location: 76968 - 77894 (-)
Gene ID: k141_7761_63
Type: TC
Location: 77963 - 79285 (-)
Gene ID: k141_7761_64
Type: TF
Location: 79656 - 80420 (+)
Gene ID: k141_7761_65
Type: pfam
Location: 80431 - 81099 (+)
Gene ID: k141_7761_66
Type: CAZyme
Location: 81181 - 83019 (-)
Gene ID: k141_7761_67
Type: STP
Location: 83170 - 84942 (-)
Gene ID: k141_7761_68
Type: TF
Location: 84932 - 86503 (-)
Gene ID: k141_7761_69
Type: TC
Location: 86720 - 87631 (+)
Gene ID: k141_7761_70
Type: TC
Location: 87624 - 88448 (+)
Gene ID: k141_7761_71
Type: TC
Location: 88480 - 89739 (+)
Gene ID: k141_7761_72
Type: TF
Location: 89795 - 91243 (-)
Gene ID: k141_7761_73
Type: STP
Location: 91405 - 93615 (+)
Gene ID: k141_7761_74
Type: CAZyme
Location: 93653 - 95707 (-)
Gene ID: k141_7761_75
Type: TF
Location: 95838 - 96500 (-)
Gene ID: k141_7761_76
Type: TF
Location: 96809 - 97135 (+)
Gene ID: k141_7761_77
Type: TC
Location: 97221 - 98393 (-)
Gene ID: k141_7761_78
Type: TC
Location: 98390 - 99103 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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