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Cluster: CGMR029416_CGC68

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_116642 k141_116642_12 10818 12008 - GH179
pfam k141_116642 k141_116642_13 12012 13001 - AP_endonuc_2
pfam k141_116642 k141_116642_14 12998 13444 - CGDB
TC k141_116642 k141_116642_15 13457 15154 - 3.A.1.20.4
pfam k141_116642 k141_116642_16 15170 16258 - MR_MLE_N | MR_MLE_C
TC k141_116642 k141_116642_17 16302 17393 - 3.A.1.20.1
TC k141_116642 k141_116642_18 17462 18475 - 3.A.1.20.2
Gene ID: k141_116642_12
Type: CAZyme
Location: 10818 - 12008 (-)
Gene ID: k141_116642_13
Type: pfam
Location: 12012 - 13001 (-)
Gene ID: k141_116642_14
Type: pfam
Location: 12998 - 13444 (-)
Gene ID: k141_116642_15
Type: TC
Location: 13457 - 15154 (-)
Gene ID: k141_116642_16
Type: pfam
Location: 15170 - 16258 (-)
Gene ID: k141_116642_17
Type: TC
Location: 16302 - 17393 (-)
Gene ID: k141_116642_18
Type: TC
Location: 17462 - 18475 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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