dbCAN Logo

Cluster: CGMR029416_CGC64

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_83814 k141_83814_28 34322 35995 - 3.A.1.1.10
TC k141_83814 k141_83814_29 36117 37022 - 3.A.1.1.10
TC k141_83814 k141_83814_30 37042 37989 - 3.A.1.1.10
TC k141_83814 k141_83814_31 38088 39905 - 8.A.59.2.1
TF k141_83814 k141_83814_32 39902 41446 - HTH_AraC
CAZyme k141_83814 k141_83814_33 41816 43237 + GH32
CAZyme k141_83814 k141_83814_34 43260 44657 + GH32
TC k141_83814 k141_83814_35 44824 46359 + 3.A.1.121.4
pfam k141_83814 k141_83814_36 46430 47284 - PG_binding_1 | CHAP
TC k141_83814 k141_83814_37 47553 48497 + 3.A.1.1.10
TC k141_83814 k141_83814_38 48519 49409 + 3.A.1.1.29
STP k141_83814 k141_83814_39 49480 51045 + SBP_bac_1
TC k141_83814 k141_83814_40 51147 52937 + 8.A.59.2.1
TF k141_83814 k141_83814_41 52912 54450 + HTH_AraC | HTH_AraC
CAZyme k141_83814 k141_83814_42 54577 56505 + GH36
Gene ID: k141_83814_28
Type: TC
Location: 34322 - 35995 (-)
Gene ID: k141_83814_29
Type: TC
Location: 36117 - 37022 (-)
Gene ID: k141_83814_30
Type: TC
Location: 37042 - 37989 (-)
Gene ID: k141_83814_31
Type: TC
Location: 38088 - 39905 (-)
Gene ID: k141_83814_32
Type: TF
Location: 39902 - 41446 (-)
Gene ID: k141_83814_33
Type: CAZyme
Location: 41816 - 43237 (+)
Gene ID: k141_83814_34
Type: CAZyme
Location: 43260 - 44657 (+)
Gene ID: k141_83814_35
Type: TC
Location: 44824 - 46359 (+)
Gene ID: k141_83814_36
Type: pfam
Location: 46430 - 47284 (-)
Gene ID: k141_83814_37
Type: TC
Location: 47553 - 48497 (+)
Gene ID: k141_83814_38
Type: TC
Location: 48519 - 49409 (+)
Gene ID: k141_83814_39
Type: STP
Location: 49480 - 51045 (+)
Gene ID: k141_83814_40
Type: TC
Location: 51147 - 52937 (+)
Gene ID: k141_83814_41
Type: TF
Location: 52912 - 54450 (+)
Gene ID: k141_83814_42
Type: CAZyme
Location: 54577 - 56505 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List