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Cluster: CGMR029416_CGC60

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_86923 k141_86923_20 17043 18350 - 2.A.57.1.11
pfam k141_86923 k141_86923_21 18436 19038 - DUF6305
pfam k141_86923 k141_86923_22 19935 21200 + Orn_DAP_Arg_deC | Orn_Arg_deC_N
TC k141_86923 k141_86923_23 21475 22227 + 3.A.1.3.26
TC k141_86923 k141_86923_24 22240 23106 + 3.A.1.3.16
TC k141_86923 k141_86923_25 23287 23979 + 3.A.1.3.16
TC k141_86923 k141_86923_26 23972 24667 + 3.A.1.3.8
pfam k141_86923 k141_86923_27 24827 25603 + AP_endonuc_2
CAZyme k141_86923 k141_86923_28 25781 26863 + GH179
Gene ID: k141_86923_20
Type: TC
Location: 17043 - 18350 (-)
Gene ID: k141_86923_21
Type: pfam
Location: 18436 - 19038 (-)
Gene ID: k141_86923_22
Type: pfam
Location: 19935 - 21200 (+)
Gene ID: k141_86923_23
Type: TC
Location: 21475 - 22227 (+)
Gene ID: k141_86923_24
Type: TC
Location: 22240 - 23106 (+)
Gene ID: k141_86923_25
Type: TC
Location: 23287 - 23979 (+)
Gene ID: k141_86923_26
Type: TC
Location: 23972 - 24667 (+)
Gene ID: k141_86923_27
Type: pfam
Location: 24827 - 25603 (+)
Gene ID: k141_86923_28
Type: CAZyme
Location: 25781 - 26863 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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