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Cluster: CGMR029416_CGC59

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_50011 k141_50011_2 560 1849 + 3.A.7.14.1
pfam k141_50011 k141_50011_3 2394 3503 - Phage_integrase | Phage_int_SAM_5 | Phage_int_SAM_3 | Phage_int_M
pfam k141_50011 k141_50011_4 3797 5902 + Helicase_C | HA | HA | HA | HA | ResIII
CAZyme k141_50011 k141_50011_5 5912 6841 + GT2
TC k141_50011 k141_50011_6 6871 8325 + 3.A.1.103.2
TC k141_50011 k141_50011_7 8336 9073 + 3.A.1.103.1
Gene ID: k141_50011_2
Type: TC
Location: 560 - 1849 (+)
Gene ID: k141_50011_3
Type: pfam
Location: 2394 - 3503 (-)
Gene ID: k141_50011_4
Type: pfam
Location: 3797 - 5902 (+)
Gene ID: k141_50011_5
Type: CAZyme
Location: 5912 - 6841 (+)
Gene ID: k141_50011_6
Type: TC
Location: 6871 - 8325 (+)
Gene ID: k141_50011_7
Type: TC
Location: 8336 - 9073 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_50011_2 vegetarian > omnivore 1.52053 0.01057

🧭 Explore Read Mapping of CGC

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