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Cluster: CGMR029416_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_72808 k141_72808_1 3 1046 - GH172
pfam k141_72808 k141_72808_2 1072 2208 - DUF4185
TC k141_72808 k141_72808_3 2223 3062 - 3.A.1.1.4
TC k141_72808 k141_72808_4 3075 3998 - 3.A.1.1.20
TC k141_72808 k141_72808_5 4071 5366 - 3.A.1.1.40
pfam k141_72808 k141_72808_6 5383 7560 - DUF6259
TF k141_72808 k141_72808_7 7856 8860 - LacI
CAZyme k141_72808 k141_72808_8 9114 11471 + GH116
Gene ID: k141_72808_1
Type: CAZyme
Location: 3 - 1046 (-)
Gene ID: k141_72808_2
Type: pfam
Location: 1072 - 2208 (-)
Gene ID: k141_72808_3
Type: TC
Location: 2223 - 3062 (-)
Gene ID: k141_72808_4
Type: TC
Location: 3075 - 3998 (-)
Gene ID: k141_72808_5
Type: TC
Location: 4071 - 5366 (-)
Gene ID: k141_72808_6
Type: pfam
Location: 5383 - 7560 (-)
Gene ID: k141_72808_7
Type: TF
Location: 7856 - 8860 (-)
Gene ID: k141_72808_8
Type: CAZyme
Location: 9114 - 11471 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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