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Cluster: CGMR029416_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_50760 k141_50760_4 3116 4285 - 2.A.4.7.4
TF k141_50760 k141_50760_5 4388 5233 - HTH_AraC
CAZyme k141_50760 k141_50760_6 5355 6662 + GH4
TF k141_50760 k141_50760_7 6778 7521 - HTH_AraC
TC k141_50760 k141_50760_8 7789 8736 + 3.A.1.1.29
TC k141_50760 k141_50760_9 8755 9681 + 3.A.1.1.29
Gene ID: k141_50760_4
Type: TC
Location: 3116 - 4285 (-)
Gene ID: k141_50760_5
Type: TF
Location: 4388 - 5233 (-)
Gene ID: k141_50760_6
Type: CAZyme
Location: 5355 - 6662 (+)
Gene ID: k141_50760_7
Type: TF
Location: 6778 - 7521 (-)
Gene ID: k141_50760_8
Type: TC
Location: 7789 - 8736 (+)
Gene ID: k141_50760_9
Type: TC
Location: 8755 - 9681 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_50760_6 vegetarian > vegan 1.30642 0.00364

🧭 Explore Read Mapping of CGC

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