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Cluster: CGMR029416_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_23002 k141_23002_23 22380 23240 - 3.A.1.149.1
TF k141_23002 k141_23002_24 23270 23647 - GntR
TC k141_23002 k141_23002_25 24147 26039 + 3.A.1.5.14
TC k141_23002 k141_23002_26 26241 27239 + 3.A.1.5.13
TC k141_23002 k141_23002_27 27259 28095 + 3.A.1.5.30
TC k141_23002 k141_23002_28 28098 29069 + 3.A.1.5.13
TC k141_23002 k141_23002_29 29071 30048 + 3.A.1.5.13
pfam k141_23002 k141_23002_30 30276 31175 + AP_endonuc_2
CAZyme k141_23002 k141_23002_31 31271 34384 + GH38
NULL(UNKNOWN) k141_23002 k141_23002_32 34455 35069 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_23002 k141_23002_33 35069 37180 - AFOR_C | AFOR_N
TC k141_23002 k141_23002_34 37202 37846 - 5.A.3.10.1
TC k141_23002 k141_23002_35 38252 39853 - 3.A.1.5.18
TC k141_23002 k141_23002_36 39905 40873 - 3.A.1.5.22
TC k141_23002 k141_23002_37 40870 41877 - 3.A.1.5.35
TC k141_23002 k141_23002_38 41914 42912 - 3.A.1.5.2
TC k141_23002 k141_23002_39 42944 43858 - 3.A.1.5.2
Gene ID: k141_23002_23
Type: TC
Location: 22380 - 23240 (-)
Gene ID: k141_23002_24
Type: TF
Location: 23270 - 23647 (-)
Gene ID: k141_23002_25
Type: TC
Location: 24147 - 26039 (+)
Gene ID: k141_23002_26
Type: TC
Location: 26241 - 27239 (+)
Gene ID: k141_23002_27
Type: TC
Location: 27259 - 28095 (+)
Gene ID: k141_23002_28
Type: TC
Location: 28098 - 29069 (+)
Gene ID: k141_23002_29
Type: TC
Location: 29071 - 30048 (+)
Gene ID: k141_23002_30
Type: pfam
Location: 30276 - 31175 (+)
Gene ID: k141_23002_31
Type: CAZyme
Location: 31271 - 34384 (+)
Gene ID: k141_23002_32
Type:
Location: 34455 - 35069 (-)
Gene ID: k141_23002_33
Type: pfam
Location: 35069 - 37180 (-)
Gene ID: k141_23002_34
Type: TC
Location: 37202 - 37846 (-)
Gene ID: k141_23002_35
Type: TC
Location: 38252 - 39853 (-)
Gene ID: k141_23002_36
Type: TC
Location: 39905 - 40873 (-)
Gene ID: k141_23002_37
Type: TC
Location: 40870 - 41877 (-)
Gene ID: k141_23002_38
Type: TC
Location: 41914 - 42912 (-)
Gene ID: k141_23002_39
Type: TC
Location: 42944 - 43858 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_23002_33 vegetarian > vegan 5.67212 0.00364
k141_23002_34 vegetarian > vegan 4.67270 0.00364

🧭 Explore Read Mapping of CGC

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