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Cluster: CGMR029416_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_107496 k141_107496_38 44334 45683 + 2.A.22.5.2
pfam k141_107496 k141_107496_39 45746 46189 - DUF188
pfam k141_107496 k141_107496_40 46193 47287 - DUF362
CAZyme k141_107496 k141_107496_41 47441 49225 + GH2
TF k141_107496 k141_107496_42 49350 49676 + PadR
pfam k141_107496 k141_107496_43 49663 50193 + DUF2812
CAZyme k141_107496 k141_107496_44 50299 51261 - CE7
Gene ID: k141_107496_38
Type: TC
Location: 44334 - 45683 (+)
Gene ID: k141_107496_39
Type: pfam
Location: 45746 - 46189 (-)
Gene ID: k141_107496_40
Type: pfam
Location: 46193 - 47287 (-)
Gene ID: k141_107496_41
Type: CAZyme
Location: 47441 - 49225 (+)
Gene ID: k141_107496_42
Type: TF
Location: 49350 - 49676 (+)
Gene ID: k141_107496_43
Type: pfam
Location: 49663 - 50193 (+)
Gene ID: k141_107496_44
Type: CAZyme
Location: 50299 - 51261 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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