dbCAN Logo

Cluster: CGMR029416_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_59117 k141_59117_29 32850 34265 - GH43_9
TC k141_59117 k141_59117_30 34270 35133 - 3.A.1.1.11
TC k141_59117 k141_59117_31 35147 36064 - 3.A.1.1.20
STP k141_59117 k141_59117_32 36160 37422 - SBP_bac_1
TF k141_59117 k141_59117_33 37538 38962 - HTH_AraC
TC k141_59117 k141_59117_34 38950 40749 - 8.A.59.2.1
pfam k141_59117 k141_59117_35 40866 41444 - TK
TC k141_59117 k141_59117_36 41482 42396 - 2.A.69.4.6
NULL(UNKNOWN) k141_59117 k141_59117_37 42519 42695 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_59117 k141_59117_38 42692 43183 + 9.A.24.1.7
TC k141_59117 k141_59117_39 43273 43806 + 3.A.1.25.2
Gene ID: k141_59117_29
Type: CAZyme
Location: 32850 - 34265 (-)
Gene ID: k141_59117_30
Type: TC
Location: 34270 - 35133 (-)
Gene ID: k141_59117_31
Type: TC
Location: 35147 - 36064 (-)
Gene ID: k141_59117_32
Type: STP
Location: 36160 - 37422 (-)
Gene ID: k141_59117_33
Type: TF
Location: 37538 - 38962 (-)
Gene ID: k141_59117_34
Type: TC
Location: 38950 - 40749 (-)
Gene ID: k141_59117_35
Type: pfam
Location: 40866 - 41444 (-)
Gene ID: k141_59117_36
Type: TC
Location: 41482 - 42396 (-)
Gene ID: k141_59117_37
Type:
Location: 42519 - 42695 (+)
Gene ID: k141_59117_38
Type: TC
Location: 42692 - 43183 (+)
Gene ID: k141_59117_39
Type: TC
Location: 43273 - 43806 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List