dbCAN Logo

Cluster: CGMR029416_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_72079 k141_72079_35 33559 34644 - GH179
TF k141_72079 k141_72079_36 34749 35630 + HTH_AraC
pfam k141_72079 k141_72079_37 35820 37022 + SBP_bac_8
TC k141_72079 k141_72079_38 37155 38177 + 3.A.1.1.16
pfam k141_72079 k141_72079_39 38193 40130 + BPD_transp_1 | BPD_transp_1
TC k141_72079 k141_72079_40 40185 40979 - 2.A.5.5.2
pfam k141_72079 k141_72079_41 41001 41918 - SUFBD_core
TC k141_72079 k141_72079_42 41911 42642 - 3.A.1.1.49
TF k141_72079 k141_72079_43 42782 43705 - HTH_1
TC k141_72079 k141_72079_44 43826 45199 + 2.A.66.1.25
Gene ID: k141_72079_35
Type: CAZyme
Location: 33559 - 34644 (-)
Gene ID: k141_72079_36
Type: TF
Location: 34749 - 35630 (+)
Gene ID: k141_72079_37
Type: pfam
Location: 35820 - 37022 (+)
Gene ID: k141_72079_38
Type: TC
Location: 37155 - 38177 (+)
Gene ID: k141_72079_39
Type: pfam
Location: 38193 - 40130 (+)
Gene ID: k141_72079_40
Type: TC
Location: 40185 - 40979 (-)
Gene ID: k141_72079_41
Type: pfam
Location: 41001 - 41918 (-)
Gene ID: k141_72079_42
Type: TC
Location: 41911 - 42642 (-)
Gene ID: k141_72079_43
Type: TF
Location: 42782 - 43705 (-)
Gene ID: k141_72079_44
Type: TC
Location: 43826 - 45199 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List