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Cluster: CGMR029416_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_96431 k141_96431_23 22202 23392 - GH27
TF k141_96431 k141_96431_24 23425 24462 - HTH_AraC
TC k141_96431 k141_96431_25 24466 26202 - 8.A.59.2.1
pfam k141_96431 k141_96431_26 26279 28015 - Glyco_hydro_31_2nd
pfam k141_96431 k141_96431_27 28079 29704 - SBP_bac_8
TC k141_96431 k141_96431_28 29763 30662 - 3.A.1.1.29
TC k141_96431 k141_96431_29 30676 31617 - 3.A.1.1.29
TC k141_96431 k141_96431_30 31782 32672 - 3.A.1.1.9
TC k141_96431 k141_96431_31 32699 33622 - 3.A.1.1.9
STP k141_96431 k141_96431_32 33731 35365 - SBP_bac_1
TF k141_96431 k141_96431_33 35599 37080 + HTH_AraC | HTH_AraC
TC k141_96431 k141_96431_34 37077 38792 + 8.A.59.2.1
CAZyme k141_96431 k141_96431_35 38944 40449 - GH51_1
Gene ID: k141_96431_23
Type: CAZyme
Location: 22202 - 23392 (-)
Gene ID: k141_96431_24
Type: TF
Location: 23425 - 24462 (-)
Gene ID: k141_96431_25
Type: TC
Location: 24466 - 26202 (-)
Gene ID: k141_96431_26
Type: pfam
Location: 26279 - 28015 (-)
Gene ID: k141_96431_27
Type: pfam
Location: 28079 - 29704 (-)
Gene ID: k141_96431_28
Type: TC
Location: 29763 - 30662 (-)
Gene ID: k141_96431_29
Type: TC
Location: 30676 - 31617 (-)
Gene ID: k141_96431_30
Type: TC
Location: 31782 - 32672 (-)
Gene ID: k141_96431_31
Type: TC
Location: 32699 - 33622 (-)
Gene ID: k141_96431_32
Type: STP
Location: 33731 - 35365 (-)
Gene ID: k141_96431_33
Type: TF
Location: 35599 - 37080 (+)
Gene ID: k141_96431_34
Type: TC
Location: 37077 - 38792 (+)
Gene ID: k141_96431_35
Type: CAZyme
Location: 38944 - 40449 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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