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Cluster: CGMR029416_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_11839 k141_11839_6 4486 5544 + 3.A.1.24.2
TC k141_11839 k141_11839_7 5510 6172 + 3.A.1.24.5
TC k141_11839 k141_11839_8 6226 7014 + 3.A.1.24.5
TC k141_11839 k141_11839_9 7082 9154 - 2.A.66.1.32
TF k141_11839 k141_11839_10 9656 10099 + LytTR
NULL(UNKNOWN) k141_11839 k141_11839_11 10105 10530 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_11839 k141_11839_12 10517 11452 + 3.A.1.105.1
TC k141_11839 k141_11839_13 11430 12278 + 3.A.1.130.1
CAZyme k141_11839 k141_11839_14 12356 13666 + GH125
pfam k141_11839 k141_11839_15 13753 14229 - tRNA_edit
CAZyme k141_11839 k141_11839_16 14233 15252 - GT2
pfam k141_11839 k141_11839_17 15249 16217 - Glycos_transf_2 | Glyco_trans_2_3
pfam k141_11839 k141_11839_18 16396 19458 + UvrD-helicase | UvrD-helicase | AAA_19 | UvrD_C | UvrD_C | UvrD_C_2
CAZyme k141_11839 k141_11839_19 19472 20455 + GT2
TC k141_11839 k141_11839_20 20497 21447 + 2.A.69.3.2
Gene ID: k141_11839_6
Type: TC
Location: 4486 - 5544 (+)
Gene ID: k141_11839_7
Type: TC
Location: 5510 - 6172 (+)
Gene ID: k141_11839_8
Type: TC
Location: 6226 - 7014 (+)
Gene ID: k141_11839_9
Type: TC
Location: 7082 - 9154 (-)
Gene ID: k141_11839_10
Type: TF
Location: 9656 - 10099 (+)
Gene ID: k141_11839_11
Type:
Location: 10105 - 10530 (+)
Gene ID: k141_11839_12
Type: TC
Location: 10517 - 11452 (+)
Gene ID: k141_11839_13
Type: TC
Location: 11430 - 12278 (+)
Gene ID: k141_11839_14
Type: CAZyme
Location: 12356 - 13666 (+)
Gene ID: k141_11839_15
Type: pfam
Location: 13753 - 14229 (-)
Gene ID: k141_11839_16
Type: CAZyme
Location: 14233 - 15252 (-)
Gene ID: k141_11839_17
Type: pfam
Location: 15249 - 16217 (-)
Gene ID: k141_11839_18
Type: pfam
Location: 16396 - 19458 (+)
Gene ID: k141_11839_19
Type: CAZyme
Location: 19472 - 20455 (+)
Gene ID: k141_11839_20
Type: TC
Location: 20497 - 21447 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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