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Cluster: CGMR029416_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_50183 k141_50183_49 56575 59034 + GT35
pfam k141_50183 k141_50183_50 59506 60480 + ABC_sub_bind
TC k141_50183 k141_50183_51 60637 61521 + 3.A.1.34.1
TC k141_50183 k141_50183_52 61514 62287 + 3.A.1.34.1
CAZyme k141_50183 k141_50183_53 62416 63810 + GH4
TF k141_50183 k141_50183_54 64070 64900 - HTH_3
pfam k141_50183 k141_50183_55 65118 66242 - PGA_cap
CAZyme k141_50183 k141_50183_56 66303 67388 - GT2
Gene ID: k141_50183_49
Type: CAZyme
Location: 56575 - 59034 (+)
Gene ID: k141_50183_50
Type: pfam
Location: 59506 - 60480 (+)
Gene ID: k141_50183_51
Type: TC
Location: 60637 - 61521 (+)
Gene ID: k141_50183_52
Type: TC
Location: 61514 - 62287 (+)
Gene ID: k141_50183_53
Type: CAZyme
Location: 62416 - 63810 (+)
Gene ID: k141_50183_54
Type: TF
Location: 64070 - 64900 (-)
Gene ID: k141_50183_55
Type: pfam
Location: 65118 - 66242 (-)
Gene ID: k141_50183_56
Type: CAZyme
Location: 66303 - 67388 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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