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Cluster: CGMR029240_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_362319 k141_362319_40 47493 47831 - 4.A.3.1.2
STP k141_362319 k141_362319_41 48046 48303 - Peripla_BP_3
CAZyme k141_362319 k141_362319_42 48435 49199 + GH1
TF k141_362319 k141_362319_43 49467 50504 - LacI
CAZyme k141_362319 k141_362319_44 50846 52288 + GH1
TC k141_362319 k141_362319_45 52465 54225 + 4.A.3.1.1
TF k141_362319 k141_362319_46 54639 55649 - LacI
TC k141_362319 k141_362319_47 55925 57703 + 4.A.3.1.1
CAZyme k141_362319 k141_362319_48 57780 59201 + GH1
pfam k141_362319 k141_362319_49 59641 60873 + Fic
STP k141_362319 k141_362319_50 60982 61377 - DeoRC
TC k141_362319 k141_362319_51 61540 63234 - 4.A.3.1.1
Gene ID: k141_362319_40
Type: TC
Location: 47493 - 47831 (-)
Gene ID: k141_362319_41
Type: STP
Location: 48046 - 48303 (-)
Gene ID: k141_362319_42
Type: CAZyme
Location: 48435 - 49199 (+)
Gene ID: k141_362319_43
Type: TF
Location: 49467 - 50504 (-)
Gene ID: k141_362319_44
Type: CAZyme
Location: 50846 - 52288 (+)
Gene ID: k141_362319_45
Type: TC
Location: 52465 - 54225 (+)
Gene ID: k141_362319_46
Type: TF
Location: 54639 - 55649 (-)
Gene ID: k141_362319_47
Type: TC
Location: 55925 - 57703 (+)
Gene ID: k141_362319_48
Type: CAZyme
Location: 57780 - 59201 (+)
Gene ID: k141_362319_49
Type: pfam
Location: 59641 - 60873 (+)
Gene ID: k141_362319_50
Type: STP
Location: 60982 - 61377 (-)
Gene ID: k141_362319_51
Type: TC
Location: 61540 - 63234 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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