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Cluster: CGMR029240_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_376345 k141_376345_4 3970 5352 - GH4
TC k141_376345 k141_376345_5 5356 6972 - 4.A.1.1.3
pfam k141_376345 k141_376345_6 7072 7938 - PRD | PRD | CAT_RBD
TC k141_376345 k141_376345_7 7945 8457 - 4.A.1.2.5
STP k141_376345 k141_376345_8 8801 9562 - Fer4
TC k141_376345 k141_376345_9 10183 12441 - 1.I.1.1.3
STP k141_376345 k141_376345_10 13030 13992 + FHA
STP k141_376345 k141_376345_11 14164 16248 + Pkinase
TC k141_376345 k141_376345_12 16500 18839 + 3.A.3.5.15
Gene ID: k141_376345_4
Type: CAZyme
Location: 3970 - 5352 (-)
Gene ID: k141_376345_5
Type: TC
Location: 5356 - 6972 (-)
Gene ID: k141_376345_6
Type: pfam
Location: 7072 - 7938 (-)
Gene ID: k141_376345_7
Type: TC
Location: 7945 - 8457 (-)
Gene ID: k141_376345_8
Type: STP
Location: 8801 - 9562 (-)
Gene ID: k141_376345_9
Type: TC
Location: 10183 - 12441 (-)
Gene ID: k141_376345_10
Type: STP
Location: 13030 - 13992 (+)
Gene ID: k141_376345_11
Type: STP
Location: 14164 - 16248 (+)
Gene ID: k141_376345_12
Type: TC
Location: 16500 - 18839 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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