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Cluster: CGMR029240_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_303480 k141_303480_54 56064 56507 + 4.A.6.1.16
pfam k141_303480 k141_303480_55 56507 56788 + YajC
TC k141_303480 k141_303480_56 56825 57307 + 4.A.6.1.4
TC k141_303480 k141_303480_57 57398 58198 + 4.A.6.1.4
TC k141_303480 k141_303480_58 58188 59270 + 4.A.6.1.4
TF k141_303480 k141_303480_59 59456 60187 + GntR
STP k141_303480 k141_303480_60 60302 61468 + SIS | SIS
CAZyme k141_303480 k141_303480_61 61586 62755 + CE9
Gene ID: k141_303480_54
Type: TC
Location: 56064 - 56507 (+)
Gene ID: k141_303480_55
Type: pfam
Location: 56507 - 56788 (+)
Gene ID: k141_303480_56
Type: TC
Location: 56825 - 57307 (+)
Gene ID: k141_303480_57
Type: TC
Location: 57398 - 58198 (+)
Gene ID: k141_303480_58
Type: TC
Location: 58188 - 59270 (+)
Gene ID: k141_303480_59
Type: TF
Location: 59456 - 60187 (+)
Gene ID: k141_303480_60
Type: STP
Location: 60302 - 61468 (+)
Gene ID: k141_303480_61
Type: CAZyme
Location: 61586 - 62755 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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