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Cluster: CGMR028843_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_46028 k141_46028_84 97148 98257 + GT4
TF k141_46028 k141_46028_85 98403 100193 + MarR
TC k141_46028 k141_46028_86 100202 101680 + 2.A.3.3.22
NULL(UNKNOWN) k141_46028 k141_46028_87 101677 102270 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_46028 k141_46028_88 102613 104379 + NTP_transferase | APH | NTP_transf_3
TC k141_46028 k141_46028_89 104472 105728 + 9.A.28.1.1
pfam k141_46028 k141_46028_90 105867 107645 + NTP_transferase | Choline_kinase | APH | MarR_2 | NTP_transf_3 | HTH_24
pfam k141_46028 k141_46028_91 107855 109666 + NTP_transferase | IspD | Choline_kinase | APH | NTP_transf_3
TC k141_46028 k141_46028_92 109684 110292 - 9.B.18.1.2
STP k141_46028 k141_46028_93 110292 111527 - Aminotran_1_2
CAZyme k141_46028 k141_46028_94 111581 112771 - GT4
pfam k141_46028 k141_46028_95 113126 114424 + Sugar_tr | MFS_1
TC k141_46028 k141_46028_96 114470 117079 + 5.A.3.7.1
TC k141_46028 k141_46028_97 117085 117900 + 5.A.3.7.1
TC k141_46028 k141_46028_98 117945 119357 + 2.A.47.1.8
TF k141_46028 k141_46028_99 119547 120785 + GerE | HTH_1
TC k141_46028 k141_46028_100 121138 122052 + 3.A.1.24.2
TC k141_46028 k141_46028_101 122054 122731 + 3.A.1.24.5
TC k141_46028 k141_46028_102 122843 123694 + 3.A.1.24.5
Gene ID: k141_46028_84
Type: CAZyme
Location: 97148 - 98257 (+)
Gene ID: k141_46028_85
Type: TF
Location: 98403 - 100193 (+)
Gene ID: k141_46028_86
Type: TC
Location: 100202 - 101680 (+)
Gene ID: k141_46028_87
Type:
Location: 101677 - 102270 (+)
Gene ID: k141_46028_88
Type: pfam
Location: 102613 - 104379 (+)
Gene ID: k141_46028_89
Type: TC
Location: 104472 - 105728 (+)
Gene ID: k141_46028_90
Type: pfam
Location: 105867 - 107645 (+)
Gene ID: k141_46028_91
Type: pfam
Location: 107855 - 109666 (+)
Gene ID: k141_46028_92
Type: TC
Location: 109684 - 110292 (-)
Gene ID: k141_46028_93
Type: STP
Location: 110292 - 111527 (-)
Gene ID: k141_46028_94
Type: CAZyme
Location: 111581 - 112771 (-)
Gene ID: k141_46028_95
Type: pfam
Location: 113126 - 114424 (+)
Gene ID: k141_46028_96
Type: TC
Location: 114470 - 117079 (+)
Gene ID: k141_46028_97
Type: TC
Location: 117085 - 117900 (+)
Gene ID: k141_46028_98
Type: TC
Location: 117945 - 119357 (+)
Gene ID: k141_46028_99
Type: TF
Location: 119547 - 120785 (+)
Gene ID: k141_46028_100
Type: TC
Location: 121138 - 122052 (+)
Gene ID: k141_46028_101
Type: TC
Location: 122054 - 122731 (+)
Gene ID: k141_46028_102
Type: TC
Location: 122843 - 123694 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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