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Cluster: CGMR028843_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_46028 k141_46028_67 77746 79893 + GH73
pfam k141_46028 k141_46028_68 80086 81543 + DUF2142
TC k141_46028 k141_46028_69 81723 82499 + 3.A.1.103.6
TC k141_46028 k141_46028_70 82518 83309 + 3.A.1.103.1
CAZyme k141_46028 k141_46028_71 83311 84327 + GT2
CAZyme k141_46028 k141_46028_72 84324 85316 + GT2
CAZyme k141_46028 k141_46028_73 85318 86448 + GT2
CAZyme k141_46028 k141_46028_74 86570 87784 + GT2
CAZyme k141_46028 k141_46028_75 87781 88911 + GT2
CAZyme k141_46028 k141_46028_76 88919 90136 + GT2
pfam k141_46028 k141_46028_77 90133 91446 + UDPG_MGDP_dh | NAD_Gly3P_dh_N | 3HCDH_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme k141_46028 k141_46028_78 91512 92675 - GT4
CAZyme k141_46028 k141_46028_79 92852 93532 + GT2
Gene ID: k141_46028_67
Type: CAZyme
Location: 77746 - 79893 (+)
Gene ID: k141_46028_68
Type: pfam
Location: 80086 - 81543 (+)
Gene ID: k141_46028_69
Type: TC
Location: 81723 - 82499 (+)
Gene ID: k141_46028_70
Type: TC
Location: 82518 - 83309 (+)
Gene ID: k141_46028_71
Type: CAZyme
Location: 83311 - 84327 (+)
Gene ID: k141_46028_72
Type: CAZyme
Location: 84324 - 85316 (+)
Gene ID: k141_46028_73
Type: CAZyme
Location: 85318 - 86448 (+)
Gene ID: k141_46028_74
Type: CAZyme
Location: 86570 - 87784 (+)
Gene ID: k141_46028_75
Type: CAZyme
Location: 87781 - 88911 (+)
Gene ID: k141_46028_76
Type: CAZyme
Location: 88919 - 90136 (+)
Gene ID: k141_46028_77
Type: pfam
Location: 90133 - 91446 (+)
Gene ID: k141_46028_78
Type: CAZyme
Location: 91512 - 92675 (-)
Gene ID: k141_46028_79
Type: CAZyme
Location: 92852 - 93532 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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