Cluster: CGMR028811_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR028811
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_212306 | k141_212306_10 | 12734 | 15061 | - | 9.A.8.1.6 |
| TC | k141_212306 | k141_212306_11 | 15184 | 15405 | - | 9.A.8.1.6 |
| STP | k141_212306 | k141_212306_12 | 15445 | 15687 | - | FeoA |
| STP | k141_212306 | k141_212306_13 | 15877 | 16125 | - | PTS-HPr |
| TC | k141_212306 | k141_212306_14 | 16327 | 17790 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | k141_212306 | k141_212306_15 | 17944 | 18399 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_212306 | k141_212306_16 | 18403 | 21411 | - | GH2 |
Gene ID: k141_212306_10
Type: TC
Location: 12734 - 15061 (-)
Type: TC
Location: 12734 - 15061 (-)
Gene ID: k141_212306_11
Type: TC
Location: 15184 - 15405 (-)
Type: TC
Location: 15184 - 15405 (-)
Gene ID: k141_212306_12
Type: STP
Location: 15445 - 15687 (-)
Type: STP
Location: 15445 - 15687 (-)
Gene ID: k141_212306_13
Type: STP
Location: 15877 - 16125 (-)
Type: STP
Location: 15877 - 16125 (-)
Gene ID: k141_212306_14
Type: TC
Location: 16327 - 17790 (-)
Type: TC
Location: 16327 - 17790 (-)
Gene ID: k141_212306_15
Type:
Location: 17944 - 18399 (-)
Type:
Location: 17944 - 18399 (-)
Gene ID: k141_212306_16
Type: CAZyme
Location: 18403 - 21411 (-)
Type: CAZyme
Location: 18403 - 21411 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.