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Cluster: CGMR028811_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_136307 k141_136307_3 2739 4160 - GH1
TC k141_136307 k141_136307_4 4236 6023 - 4.A.3.1.1
TF k141_136307 k141_136307_5 6299 7309 + LacI
TC k141_136307 k141_136307_6 7642 9402 - 4.A.3.1.1
CAZyme k141_136307 k141_136307_7 9579 11021 - GH1
TF k141_136307 k141_136307_8 11363 12400 + LacI
CAZyme k141_136307 k141_136307_9 12668 14107 - GH1
TC k141_136307 k141_136307_10 14174 15949 - 4.A.3.1.1
TF k141_136307 k141_136307_11 16307 17311 + LacI
TC k141_136307 k141_136307_12 17526 17864 + 4.A.3.1.2
Gene ID: k141_136307_3
Type: CAZyme
Location: 2739 - 4160 (-)
Gene ID: k141_136307_4
Type: TC
Location: 4236 - 6023 (-)
Gene ID: k141_136307_5
Type: TF
Location: 6299 - 7309 (+)
Gene ID: k141_136307_6
Type: TC
Location: 7642 - 9402 (-)
Gene ID: k141_136307_7
Type: CAZyme
Location: 9579 - 11021 (-)
Gene ID: k141_136307_8
Type: TF
Location: 11363 - 12400 (+)
Gene ID: k141_136307_9
Type: CAZyme
Location: 12668 - 14107 (-)
Gene ID: k141_136307_10
Type: TC
Location: 14174 - 15949 (-)
Gene ID: k141_136307_11
Type: TF
Location: 16307 - 17311 (+)
Gene ID: k141_136307_12
Type: TC
Location: 17526 - 17864 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_136307_8 vegetarian > omnivore 1.03014 0.02242

🧭 Explore Read Mapping of CGC

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