Cluster: CGMR028643_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR028643
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_297712 | k141_297712_5 | 2677 | 4470 | + | 2.A.37.1.5 |
| STP | k141_297712 | k141_297712_6 | 4682 | 5359 | + | DeoRC |
| CAZyme | k141_297712 | k141_297712_7 | 5490 | 7151 | + | GH23 |
| pfam | k141_297712 | k141_297712_8 | 7336 | 8139 | + | adh_short | adh_short_C2 |
| TC | k141_297712 | k141_297712_9 | 8410 | 9810 | + | 1.I.1.1.3 |
Gene ID: k141_297712_5
Type: TC
Location: 2677 - 4470 (+)
Type: TC
Location: 2677 - 4470 (+)
Gene ID: k141_297712_6
Type: STP
Location: 4682 - 5359 (+)
Type: STP
Location: 4682 - 5359 (+)
Gene ID: k141_297712_7
Type: CAZyme
Location: 5490 - 7151 (+)
Type: CAZyme
Location: 5490 - 7151 (+)
Gene ID: k141_297712_8
Type: pfam
Location: 7336 - 8139 (+)
Type: pfam
Location: 7336 - 8139 (+)
Gene ID: k141_297712_9
Type: TC
Location: 8410 - 9810 (+)
Type: TC
Location: 8410 - 9810 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Oxalobacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.