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Cluster: CGMR028587_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_523465 k141_523465_3 1693 2295 - 2.A.51.1.6
TC k141_523465 k141_523465_4 2292 2837 - 2.A.51.1.6
pfam k141_523465 k141_523465_5 2960 3679 - Hydrolase | Hydrolase_like | HAD_2
CAZyme k141_523465 k141_523465_6 3799 8130 - SLH | SLH
pfam k141_523465 k141_523465_7 8263 9318 - Iso_dh
TC k141_523465 k141_523465_8 9850 11400 + 3.A.1.5.27
TC k141_523465 k141_523465_9 11815 13383 + 3.A.1.5.20
STP k141_523465 k141_523465_10 13534 14055 + Nitroreductase
TC k141_523465 k141_523465_11 14282 15640 - 2.A.40.1.4
Gene ID: k141_523465_3
Type: TC
Location: 1693 - 2295 (-)
Gene ID: k141_523465_4
Type: TC
Location: 2292 - 2837 (-)
Gene ID: k141_523465_5
Type: pfam
Location: 2960 - 3679 (-)
Gene ID: k141_523465_6
Type: CAZyme
Location: 3799 - 8130 (-)
Gene ID: k141_523465_7
Type: pfam
Location: 8263 - 9318 (-)
Gene ID: k141_523465_8
Type: TC
Location: 9850 - 11400 (+)
Gene ID: k141_523465_9
Type: TC
Location: 11815 - 13383 (+)
Gene ID: k141_523465_10
Type: STP
Location: 13534 - 14055 (+)
Gene ID: k141_523465_11
Type: TC
Location: 14282 - 15640 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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