Cluster: CGMR028577_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR028577
- CGC Family ID: CGCFAM_05485
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_120422 | k141_120422_5 | 2782 | 4383 | + | 2.A.6.4.1 |
| TC | k141_120422 | k141_120422_6 | 4393 | 5379 | + | 2.A.6.4.1 |
| pfam | k141_120422 | k141_120422_7 | 5393 | 5773 | + | DUF498 |
| CAZyme | k141_120422 | k141_120422_8 | 5930 | 7114 | - | GT4 |
Gene ID: k141_120422_5
Type: TC
Location: 2782 - 4383 (+)
Type: TC
Location: 2782 - 4383 (+)
Gene ID: k141_120422_6
Type: TC
Location: 4393 - 5379 (+)
Type: TC
Location: 4393 - 5379 (+)
Gene ID: k141_120422_7
Type: pfam
Location: 5393 - 5773 (+)
Type: pfam
Location: 5393 - 5773 (+)
Gene ID: k141_120422_8
Type: CAZyme
Location: 5930 - 7114 (-)
Type: CAZyme
Location: 5930 - 7114 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Parasphingorhabdus
Species
Parasphingorhabdus sp015478735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.