Cluster: CGMR028231_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR028231
- CGC Family ID: CGCFAM_01771
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1393659 | k141_1393659_10 | 12762 | 13964 | + | 3.A.1.1.2 |
| TC | k141_1393659 | k141_1393659_11 | 14071 | 15393 | + | 3.A.1.1.6 |
| TC | k141_1393659 | k141_1393659_12 | 15393 | 16238 | + | 3.A.1.1.6 |
| CAZyme | k141_1393659 | k141_1393659_13 | 16369 | 18525 | + | GH35 |
Gene ID: k141_1393659_10
Type: TC
Location: 12762 - 13964 (+)
Type: TC
Location: 12762 - 13964 (+)
Gene ID: k141_1393659_11
Type: TC
Location: 14071 - 15393 (+)
Type: TC
Location: 14071 - 15393 (+)
Gene ID: k141_1393659_12
Type: TC
Location: 15393 - 16238 (+)
Type: TC
Location: 15393 - 16238 (+)
Gene ID: k141_1393659_13
Type: CAZyme
Location: 16369 - 18525 (+)
Type: CAZyme
Location: 16369 - 18525 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
RGIG1711
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.