Cluster: CGMR028231_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR028231
- CGC Family ID: CGCFAM_01006
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1809 | k141_1809_1 | 2 | 3505 | - | GH13 |
| CAZyme | k141_1809 | k141_1809_2 | 3522 | 5459 | - | GH77 |
| TC | k141_1809 | k141_1809_3 | 5580 | 6701 | - | 3.A.23.1.1 |
| CAZyme | k141_1809 | k141_1809_4 | 6802 | 7551 | - | GT26 |
| pfam | k141_1809 | k141_1809_5 | 7583 | 8398 | - | Methyltrans_RNA | PUA_4 |
| TC | k141_1809 | k141_1809_6 | 8398 | 9894 | - | 9.B.174.1.1 |
Gene ID: k141_1809_1
Type: CAZyme
Location: 2 - 3505 (-)
Type: CAZyme
Location: 2 - 3505 (-)
Gene ID: k141_1809_2
Type: CAZyme
Location: 3522 - 5459 (-)
Type: CAZyme
Location: 3522 - 5459 (-)
Gene ID: k141_1809_3
Type: TC
Location: 5580 - 6701 (-)
Type: TC
Location: 5580 - 6701 (-)
Gene ID: k141_1809_4
Type: CAZyme
Location: 6802 - 7551 (-)
Type: CAZyme
Location: 6802 - 7551 (-)
Gene ID: k141_1809_5
Type: pfam
Location: 7583 - 8398 (-)
Type: pfam
Location: 7583 - 8398 (-)
Gene ID: k141_1809_6
Type: TC
Location: 8398 - 9894 (-)
Type: TC
Location: 8398 - 9894 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
RGIG1711
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.