Cluster: CGMR028231_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR028231
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1074308 | k141_1074308_20 | 23492 | 24610 | - | 2.A.113.1.14 |
| pfam | k141_1074308 | k141_1074308_21 | 24625 | 25260 | - | DUF1007 |
| TC | k141_1074308 | k141_1074308_22 | 25854 | 26816 | + | 1.B.56.1.2 |
| pfam | k141_1074308 | k141_1074308_23 | 26785 | 27795 | + | Radical_SAM | Fer4_12 |
| STP | k141_1074308 | k141_1074308_24 | 28190 | 28999 | + | Sigma70_r2 | Sigma70_r3 | Sigma70_r4 |
| CAZyme | k141_1074308 | k141_1074308_25 | 29000 | 29938 | - | GH17 |
Gene ID: k141_1074308_20
Type: TC
Location: 23492 - 24610 (-)
Type: TC
Location: 23492 - 24610 (-)
Gene ID: k141_1074308_21
Type: pfam
Location: 24625 - 25260 (-)
Type: pfam
Location: 24625 - 25260 (-)
Gene ID: k141_1074308_22
Type: TC
Location: 25854 - 26816 (+)
Type: TC
Location: 25854 - 26816 (+)
Gene ID: k141_1074308_23
Type: pfam
Location: 26785 - 27795 (+)
Type: pfam
Location: 26785 - 27795 (+)
Gene ID: k141_1074308_24
Type: STP
Location: 28190 - 28999 (+)
Type: STP
Location: 28190 - 28999 (+)
Gene ID: k141_1074308_25
Type: CAZyme
Location: 29000 - 29938 (-)
Type: CAZyme
Location: 29000 - 29938 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
RGIG1711
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.