Cluster: CGMR027876_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR027876
- CGC Family ID: CGCFAM_00342
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_53379 | k141_53379_64 | 79593 | 80873 | + | 3.A.1.1.44 |
| TC | k141_53379 | k141_53379_65 | 80952 | 81839 | + | 3.A.1.1.25 |
| TC | k141_53379 | k141_53379_66 | 81855 | 82694 | + | 3.A.1.1.34 |
| CAZyme | k141_53379 | k141_53379_67 | 82767 | 84947 | + | GH36 |
| TF | k141_53379 | k141_53379_68 | 85012 | 85896 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | k141_53379 | k141_53379_69 | 85915 | 86571 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_53379 | k141_53379_70 | 86796 | 87974 | + | 3.A.1.1.22 |
Gene ID: k141_53379_64
Type: TC
Location: 79593 - 80873 (+)
Type: TC
Location: 79593 - 80873 (+)
Gene ID: k141_53379_65
Type: TC
Location: 80952 - 81839 (+)
Type: TC
Location: 80952 - 81839 (+)
Gene ID: k141_53379_66
Type: TC
Location: 81855 - 82694 (+)
Type: TC
Location: 81855 - 82694 (+)
Gene ID: k141_53379_67
Type: CAZyme
Location: 82767 - 84947 (+)
Type: CAZyme
Location: 82767 - 84947 (+)
Gene ID: k141_53379_68
Type: TF
Location: 85012 - 85896 (+)
Type: TF
Location: 85012 - 85896 (+)
Gene ID: k141_53379_69
Type:
Location: 85915 - 86571 (+)
Type:
Location: 85915 - 86571 (+)
Gene ID: k141_53379_70
Type: TC
Location: 86796 - 87974 (+)
Type: TC
Location: 86796 - 87974 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp900553135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.