Cluster: CGMR027876_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR027876
- CGC Family ID: CGCFAM_03080
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_49229 | k141_49229_172 | 178763 | 180502 | + | 3.A.1.135.5 |
| TC | k141_49229 | k141_49229_173 | 180520 | 182403 | + | 3.A.1.135.5 |
| TF | k141_49229 | k141_49229_174 | 182559 | 183002 | + | MarR |
| TC | k141_49229 | k141_49229_175 | 182989 | 184752 | + | 3.A.1.135.5 |
| TC | k141_49229 | k141_49229_176 | 184718 | 186526 | + | 3.A.1.135.5 |
| NULL(UNKNOWN) | k141_49229 | k141_49229_177 | 186599 | 187099 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_49229 | k141_49229_178 | 187342 | 191868 | - | GH2 | GH2 |
Gene ID: k141_49229_172
Type: TC
Location: 178763 - 180502 (+)
Type: TC
Location: 178763 - 180502 (+)
Gene ID: k141_49229_173
Type: TC
Location: 180520 - 182403 (+)
Type: TC
Location: 180520 - 182403 (+)
Gene ID: k141_49229_174
Type: TF
Location: 182559 - 183002 (+)
Type: TF
Location: 182559 - 183002 (+)
Gene ID: k141_49229_175
Type: TC
Location: 182989 - 184752 (+)
Type: TC
Location: 182989 - 184752 (+)
Gene ID: k141_49229_176
Type: TC
Location: 184718 - 186526 (+)
Type: TC
Location: 184718 - 186526 (+)
Gene ID: k141_49229_177
Type:
Location: 186599 - 187099 (-)
Type:
Location: 186599 - 187099 (-)
Gene ID: k141_49229_178
Type: CAZyme
Location: 187342 - 191868 (-)
Type: CAZyme
Location: 187342 - 191868 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp900553135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.