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Cluster: CGMR027810_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_4779 k141_4779_41 52384 53799 - GH109
pfam k141_4779 k141_4779_42 54130 55461 + OEP | OEP
pfam k141_4779 k141_4779_43 55488 56660 + HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC k141_4779 k141_4779_44 56682 57440 + 3.A.1.122.2
TC k141_4779 k141_4779_45 57570 58790 + 3.A.1.122.2
TC k141_4779 k141_4779_46 58930 59994 + 8.A.59.2.1
Gene ID: k141_4779_41
Type: CAZyme
Location: 52384 - 53799 (-)
Gene ID: k141_4779_42
Type: pfam
Location: 54130 - 55461 (+)
Gene ID: k141_4779_43
Type: pfam
Location: 55488 - 56660 (+)
Gene ID: k141_4779_44
Type: TC
Location: 56682 - 57440 (+)
Gene ID: k141_4779_45
Type: TC
Location: 57570 - 58790 (+)
Gene ID: k141_4779_46
Type: TC
Location: 58930 - 59994 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_4779_44 vegetarian > vegan 1.05631 0.00226

🧭 Explore Read Mapping of CGC

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