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Cluster: CGMR027810_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_66345 k141_66345_11 10546 11766 + GT2
CAZyme k141_66345 k141_66345_12 11770 12894 + GT4
CAZyme k141_66345 k141_66345_13 12902 14104 + GT4
pfam k141_66345 k141_66345_14 14097 14705 + Hexapep | Hexapep_2
CAZyme k141_66345 k141_66345_15 14711 15613 - GT2
CAZyme k141_66345 k141_66345_16 15796 16968 + GT2
TC k141_66345 k141_66345_17 16982 18406 + 2.A.66.2.23
pfam k141_66345 k141_66345_18 18416 19474 + Exo_endo_phos
CAZyme k141_66345 k141_66345_19 19485 20660 + GT2
pfam k141_66345 k141_66345_20 20664 21596 - 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
TC k141_66345 k141_66345_21 21697 23307 - 3.A.1.121.4
Gene ID: k141_66345_11
Type: CAZyme
Location: 10546 - 11766 (+)
Gene ID: k141_66345_12
Type: CAZyme
Location: 11770 - 12894 (+)
Gene ID: k141_66345_13
Type: CAZyme
Location: 12902 - 14104 (+)
Gene ID: k141_66345_14
Type: pfam
Location: 14097 - 14705 (+)
Gene ID: k141_66345_15
Type: CAZyme
Location: 14711 - 15613 (-)
Gene ID: k141_66345_16
Type: CAZyme
Location: 15796 - 16968 (+)
Gene ID: k141_66345_17
Type: TC
Location: 16982 - 18406 (+)
Gene ID: k141_66345_18
Type: pfam
Location: 18416 - 19474 (+)
Gene ID: k141_66345_19
Type: CAZyme
Location: 19485 - 20660 (+)
Gene ID: k141_66345_20
Type: pfam
Location: 20664 - 21596 (-)
Gene ID: k141_66345_21
Type: TC
Location: 21697 - 23307 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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