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Cluster: CGMR027810_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_15773 k141_15773_2 1282 3501 + GH92
pfam k141_15773 k141_15773_3 3518 4210 + NTP_transferase | IspD | NTP_transf_3
TC k141_15773 k141_15773_4 4242 5669 + 1.B.73.2.2
pfam k141_15773 k141_15773_5 6175 7494 - Wzy_C
pfam k141_15773 k141_15773_6 7577 8860 - Wzy_C
CAZyme k141_15773 k141_15773_7 8869 9777 - GT101
CAZyme k141_15773 k141_15773_8 9777 10580 - GT2
STP k141_15773 k141_15773_9 10712 11272 + Sigma70_r2 | Sigma70_r4_2
STP k141_15773 k141_15773_10 11302 12468 + FecR
TC k141_15773 k141_15773_11 12572 15955 + 1.B.14.6.1
Gene ID: k141_15773_2
Type: CAZyme
Location: 1282 - 3501 (+)
Gene ID: k141_15773_3
Type: pfam
Location: 3518 - 4210 (+)
Gene ID: k141_15773_4
Type: TC
Location: 4242 - 5669 (+)
Gene ID: k141_15773_5
Type: pfam
Location: 6175 - 7494 (-)
Gene ID: k141_15773_6
Type: pfam
Location: 7577 - 8860 (-)
Gene ID: k141_15773_7
Type: CAZyme
Location: 8869 - 9777 (-)
Gene ID: k141_15773_8
Type: CAZyme
Location: 9777 - 10580 (-)
Gene ID: k141_15773_9
Type: STP
Location: 10712 - 11272 (+)
Gene ID: k141_15773_10
Type: STP
Location: 11302 - 12468 (+)
Gene ID: k141_15773_11
Type: TC
Location: 12572 - 15955 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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