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Cluster: CGMR027626_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_90734 k141_90734_8 9940 10746 - 3.A.1.14.13
TC k141_90734 k141_90734_9 10783 11838 - 3.A.1.14.6
TC k141_90734 k141_90734_10 11835 12875 - 3.A.1.14.22
STP k141_90734 k141_90734_11 12878 13948 - Peripla_BP_2
pfam k141_90734 k141_90734_12 14132 15109 - Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25
CAZyme k141_90734 k141_90734_13 15116 16294 + GT4
NULL(UNKNOWN) k141_90734 k141_90734_14 16274 18106 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_90734 k141_90734_15 18199 19359 - PorA
TC k141_90734 k141_90734_16 19556 20812 + 9.B.97.5.1
Gene ID: k141_90734_8
Type: TC
Location: 9940 - 10746 (-)
Gene ID: k141_90734_9
Type: TC
Location: 10783 - 11838 (-)
Gene ID: k141_90734_10
Type: TC
Location: 11835 - 12875 (-)
Gene ID: k141_90734_11
Type: STP
Location: 12878 - 13948 (-)
Gene ID: k141_90734_12
Type: pfam
Location: 14132 - 15109 (-)
Gene ID: k141_90734_13
Type: CAZyme
Location: 15116 - 16294 (+)
Gene ID: k141_90734_14
Type:
Location: 16274 - 18106 (-)
Gene ID: k141_90734_15
Type: pfam
Location: 18199 - 19359 (-)
Gene ID: k141_90734_16
Type: TC
Location: 19556 - 20812 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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